Sessions on Personalized/Precision Medicine at the 2016 Joint Statistical Meetings

By Steve Pierson posted 05-04-2016 13:23

  

With ASA's continued work to show the importance and benefits of engaging statistics in Big Data, the BRAIN Initiative, and the Precision Medicine Initiative, I am continuing the blog entries showing the JSM talks related to Data Science & Big Data and Neuroscience. This blog entry highlights the ones related to the Precision Medicine Initiative, the 2015 version of which is here. (Please let me know of any I missed.)

Below are just some I could identify by using the great search feature of the online program but I hope you'll spend more time using it to identify precision medicine talks. I also hope you'll let me know of any I missed.

The first list are sessions where "Precision" or "Personalized" appears in the title.

3 Integrative Genomics Analytics for Personalized Medicine — Invited Papers Sun, 7/31/2016, 2:00 PM - 3:50 PM CC-W190a


28 Recent Advances in Precision Medicine — Contributed Papers Sun, 7/31/2016, 2:00 PM - 3:50 PM CC-W193a

53 Statistical challenges and advances in the Precision Medicine Initiative — Invited Papers Sun, 7/31/2016, 4:00 PM - 5:50 PM CC-W190b

143 Challenges and Advancement in Biomarker Evaluation for Precision Medicine — Invited Papers Mon, 8/1/2016, 10:30 AM - 12:20 PM CC-W186c

165 Recent advances on interaction modeling for prediction in personalized medicine — Topic Contributed Papers Mon, 8/1/2016, 10:30 AM - 12:20 PM CC-W185d

224 Statistical Methods to Integrate Imaging and Genomics Data for Precision Medicine — Invited Papers Mon, 8/1/2016, 2:00 PM - 3:50 PM CC-W190a

282 Showcase of the Power of Statistics on Evaluating Dynamic Treatment Regimes Leading Toward Personalized Health Care — Invited Papers Tue, 8/2/2016, 8:30 AM - 10:20 AM CC-W196b

326 Statistics in personalized medicine — Invited Papers Tue, 8/2/2016, 10:30 AM - 12:20 PM CC-W196c

333 Extraordinary possibilities for mobile health to impact precision medicine — Invited Papers Tue, 8/2/2016, 10:30 AM - 12:20 PM CC-W185bc

641 Advancing Precision Medicine Using Innovative Subgroup Identification Methods — Topic Contributed Papers Thu, 8/4/2016, 8:30 AM - 10:20 AM CC-W180

688 Personalized intervention based on health care big data research — Topic Contributed Papers Thu, 8/4/2016, 10:30 AM - 12:20 PM CC-W193a

Below are other lists, beginning with talks with "precision" or "personalized" in the abstract. I've also included talks with key words associated with or related to precision medicine (I did not de-duplicate these):

See also these keyword searches: biomarker (69 results); dynamic treatment (16 results); next generation (10 results). And feel free to suggest other keywords for precision medicine to me (please!). 

See also Data Science and Big Data Sessions at the 2016 Joint Statistical Meetings and  Neuroscience talks at JSM.

For some of the other documents highlighting the important ways statisticians are advancing the BRAIN Initiative, Big Data and Precision Medicine, see:

 See other ASA Science Policy blog entries. For ASA science policy updates, follow @ASA_SciPol on Twitter.

Talks with "Precision" or "Personalized" in the abstract

Keyword Search Criteria: precision personalized returned 71 record(s)
Sunday, 07/31/2016
Global versus local observations in personalized medicine 
Debashis Ghosh, Colorado School of Public Health; Subhajyoti De, University of Colorado School of Medicine 
2:05 PM 

A subgroup identification method based on quantitative criteria 
Yan Sun, AbbVie; Samad Hedayat, University of Illinois at Chicago 
2:05 PM 

Personalized time-to-event prediction in intensive care 
Yingying Xu; Joel Dubin, University of Waterloo; Joon Lee, University of Waterloo 
2:20 PM 

Using the case-only estimator for applications in marker-guided treatment 
Chao-Kang Jason Liang, Fred Hutchinson Cancer Research Center; Holly Janes, Fred Hutchinson Cancer Research Center; James Dai, Fred Hutchinson Cancer Research Center 
2:35 PM 

Adaptive Sampling for Subgroup Analyses 
Alexander Luedtke, UC Berkeley; Antoine Chambaz, L'Université Paris Ouest Nanterre 
3:20 PM 

Individualized Subgroup Variable Selection 
Xiwei Tang, University of Illinois Urbana-Champaign; Annie Qu, University of Illinois at Urbana-Champaign 
3:35 PM 

New Integrative Paradigms of Personalized Medicine for Cancer 
Kim-Anh Do, U.T. M.D. Anderson Cancer Center; Veera Baladandayuthapani, The UT MD Anderson Cancer Center; Francesco Stingo, UT MD Anderson Cancer Center; Min Jin Ha, U.T. M.D. Anderson Cancer Center; Thierry Chekouo Tekougang, University of Texas MD Anderson Cancer Center 
4:05 PM 

Personalized Marketing and the Role of the Statistician in Retail 
Rebecca Schulthess, Eastbay / FOOTLOCKER.COM 
4:05 PM 

Integrative Analysis for Incorporating the Microbiome to Improve Precision Medicine 
Hongzhe Li, University of Pennsylvania 
4:30 PM 

Detecting Association to Precision Networks via Conditional Multi-Type Graphical Models 
Yanming Li, University of Michigan; Kevin He, University of Michiga; Jian Kang, University of Michigan; Hyokyoung (Grace) Hong, Michigan State University; Ji Zhu, University of Michigan; Yi Li, University of Michigan 
5:20 PM 

Monday, 08/01/2016
Subgroup Analysis with semiparametric model in precision medicine 
Xiaofei Chen 


Spatial Confounding in Semiparametric Regression Models for Spatial Data 
Guilherme Ludwig, University of Wisconsin-Madison; Jun Zhu, University of Wisconsin-Madison; Chun-Shu Chen, National Changhua University of Education 


Integrating diverse genomics data sets to improve precision medicine in cancer treatment 
Hongyu Zhao, Yale University 
8:35 AM 

Spatial Confounding in Semiparametric Regression Models for Spatial Data 
Guilherme Ludwig, University of Wisconsin-Madison; Jun Zhu, University of Wisconsin-Madison; Chun-Shu Chen, National Changhua University of Education 
8:50 AM 

Penalized regression method for finding differences in brain connectome graphs 
Donghyeon Yu, Keimyung University 
9:35 AM 

E-learning data analysis for building a personalized recommendation system 
Shuang Liu; K.F. LAM, The University of Hong Kong 
9:50 AM 

List-based interpretable dynamic treatment regimes 
Yichi Zhang, North Carolina State University; Eric Laber, NC State University; Anastasios Tsiatis, North Carolina State University; Marie Davidian, North Carolina State University 
10:35 AM 

Personalized dose finding using outcome weighted learning 
Guanhua Chen, Vanderbilt University ; Donglin Zeng, University of North Carolina at Chapel Hill; Michael R Kosorok, University of North Carolina at Chapel Hill 
10:35 AM 

Machine learning tools for finding biomarkers in precision medicine 
Jonathan Hibbard, University of North Carolina at Chapel Hill; Michael R Kosorok, University of North Carolina at Chapel Hill 
11:00 AM 

Bayesian Additive Regression Trees (BART) and precision medicine 
Brent Logan, Medical College of Wisconsin; Rodney Sparapani, Medical College of Wisconsin; Robert McCulloch, University of Chicago; Purushottam Laud, Medical College of Wisconsin 
11:05 AM 

Personalized screening intervals for biomarkers using joint models for longitudinal and survival data 
Dimitris Rizopoulos, Erasmus University Medical Center 
2:05 PM 

Testing for differentially expressed pathways from within-subject matched pairs of RNA-seq data sets 
Grant Schissler, Statistics GIDP; Walter W Piegorsch, University of Arizona; Yves A Lussier, University of Arizona 
2:20 PM 

Bayesian nonparametric methods for precision medicine 
Qian Guan, North Carolina State University; Eric Laber, NC State University; Dipankar Bandyopadhyay, Virginia Commonwealth University; Brian J Reich, North Carolina State University 
2:55 PM 

Design and Analysis Considerations for Precision Studies in In-Vivo Diagnostic Test Studies 
Changhong Song, FDA 
3:05 PM 

Precision Medicine: How Bayesian Empirical Subgroup Analysis Play a Role 
Judy X. Li, FDA; Wei-Chen Chen, FDA/CBER; John Scott, FDA 
3:05 PM 

Localized semi-parametric prediction: a precision medicine approach in a trauma patient population 
Sara E. Moore, University of California, Berkeley; Alan E. Hubbard, University of California, Berkeley; Mitchell J. Cohen, University of California, San Francisco 
3:35 PM 

Tuesday, 08/02/2016
Clustering for Personalized Preference Prediction 
Fan Yang, University of Minnesota, Twin Cities; Xiaotong Shen, University of Minnesota 


An efficient and reliable statistical method for estimating functional connectivity in large scale brain networks using partial correlation 
Yikai Wang, Emory University 


Confidence Interval Estimation of Prevalence When the Event is Rare 
Clinton Alverson, CDC/NCBDDD/DBDDD/BDB 


Learning Health Systems: From Ideas to Reality 
Rebecca Yates Coley, Johns Hopkins Bloomberg School of Public Health 


Adaptive Treatment Allocations for Emerging Infectious Diseases 
Eric Laber, NC State University; Nicholas Meyer, North Carolina State University, Department of Statistics; Brian J Reich, North Carolina State University; Krishna Pacifici, North Carolina State University, Department of Applied Ecology; Tao Hu, North Carolina State University 
9:00 AM 

Logical Inference of Efficacy in Subgroups and Their Combinations 
Jason C Hsu, Eli Lilly & Company and Ohio State University 
9:05 AM 

Generating Treatment Effect Modifiers from Complex Data Modalities 
Thaddeus Tarpey, Wright State University; Eva Petkova, New York Universtiy; Todd Ogden, Columbia University 
9:15 AM 

Stabilized Dynamic Treatment Regimes 
Yingqi Zhao, Fred Hutchinson Cancer Research Center; Ruoqing Zhu, University of Illinois Urbana-Champaign; Guanhua Chen, Vanderbilt University 
9:25 AM 

Statistics in Personalized Medicine 
Mark van der Laan, University of California Berkeley; Alexander Luedtke, UC Berkeley 
10:35 AM 

Data-driven dynamical systems models for the management of diabetes through mobile interventions 
Daniel J. Luckett, University of North Carolina at Chapel Hill; Eric Laber, NC State University; Michael R Kosorok, University of North Carolina at Chapel Hill 
10:35 AM 

A group-specific recommender system 
Xuan Bi; Annie Qu, University of Illinois at Urbana-Champaign; Junhui Wang, City University of Hong Kong; Xiaotong Shen, University of Minnesota 
10:35 AM 

A Random Forest of Modified Interaction Trees for Treatment Decision Rules 
Zhen Zeng, Merck; Zheng Wei, Sanofi US Services Inc.; Yuefeng Lu, Sanofi US Services Inc. 
10:35 AM 

A Random Forest of Modified Interaction Trees for Treatment Decision Rules 
Zhen Zeng, Merck; Zheng Wei, Sanofi US Services Inc.; Yuefeng Lu, Sanofi US Services Inc. 
10:35 AM 

Link-Free Identification of Simple Index Variables for the Prediction of Differential Treatment Response 
Hongjie Zhu, Sanofi 
11:05 AM 

Selecting optimal subgroups for treatment using many covariates 
Tyler J. VanderWeele, Harvard University 
11:25 AM 

Dynamic prediction of Alzheimer's disease risk based on longitudinal biomarkers and functional data 
Sheng Luo, The University of Texas at Houston; Kan Li, The University of Texas at Houston 
11:55 AM 

Bringing precision to Precision Medicine: What Error Measurement Models can do for classifiers ensemble. 
Ronaldo Rouvher Guedes Silva, Mount Sinai; Lewis Tomalin, Icahn School of Medicine; Joel Correa da Rosa, Rockefeller University; Mayte Suárez-Fariñas, Icahn School of Medicine Mount Sinai 
12:05 PM 

Module-based Reconstruction of Gene Regulatory Network into Predictive Modeling for High Dimensional Genomic Data 
Rui Zhong, AbbVie; Xin Huang, AbbVie; Viswanath Devanarayan, AbbVie 
2:35 PM 

Feature Selection for Class-imbalanced Data Using Binormal Precision-Recall Curves 
Zhongkai Liu, North Carolina State University; Howard Bondell, North Carolina State University 
2:50 PM 

Applications of remote sensing in precision agriculture at The Climate Corporation 
Gardar Johannesson, The Climate Corporation 
3:05 PM 

Wednesday, 08/03/2016
Bayesian inference in nonparanormal graphical models 
Jami Jackson, North Carolina State University; Subhashis Ghosal, North Carolina State University 


The Key Role of Statistics in Neuroimaging: Challenges and Opportunities 
DuBois Bowman, Columbia University 


Adaptive estimation of personalized maximum tolerated doses in cancer phase I clinical trials according to all toxicities and individual characteristics 
Zhengjia Chen, Emory University; Zheng Li, Pennsylvania State University; Ying Yuan, MD Anderson Cancer Center; Michael Kutner, Emory University; Taofeek Owonikoko, Emory University; Walter J. Curran, Emory University; Jeanne Kowalski, Emory University 
8:45 AM 

Adaptive estimation of personalized maximum tolerated doses in cancer phase I clinical trials according to all toxicities and individual characteristics 
Zhengjia Chen, Emory University; Zheng Li, Pennsylvania State University; Ying Yuan, MD Anderson Cancer Center; Michael Kutner, Emory University; Taofeek Owonikoko, Emory University; Walter J. Curran, Emory University; Jeanne Kowalski, Emory University 
8:45 AM 

Multiple Testing Procedures for Adaptive Enrichment Designs: Combining Group Sequential and Reallocation Approaches 
Michael Rosenblum, Johns Hopkins Bloomberg School of Public Health; Tianchen Qian, Johns Hopkins Bloomberg School of Public Health; Yu Du, Johns Hopkins Bloomberg School of Public Health; Huitong Qiu, Johns Hopkins Bloomberg School of Public Health; Aaron Fisher, John Hopkins University 
8:50 AM 

Adaptive models for profiling tumor evolution and drug response in cancer cell subpopulations 
Evan Johnson, Boston University 
8:50 AM 

The Innovations Lab: a new model for research collaborations 
Richard Smith, University of North Carolina 
10:35 AM 

Statistical and Dynamical Systems Modeling of Real-Time Adaptive m-Intervention for Pain 
Chaeryon Kang, University of Pittsburgh; Daniel M Abrams, Northwestern University; Jingyi (Jessica) Li, University of California at Los Angeles; Qi Long, Emory University; Nirmish R Shah, Duke University 
11:15 AM 

Predicting Pathologic Complete Response Using Clinical and Microarray Data in the Presence of a Dominating Class 
Jonathon Abernethy, University of Illinois at Chicago; Jie Yang, University of Illinois at Chicago 
11:35 AM 

Role of Functional Data Analysis in the Big Data Era: Applications to Precision Medicine 
Hulin Wu, University of Texas Health Science Center at Houston 
11:50 AM 

Prediction-Oriented Marker Selection (PROMISE) With application to high-dimensional regression 
Soyeon Kim, The University of Texas MD Anderson Cancer Center; J. Jack Lee, The University of Texas MD Anderson Cancer Center; Veera Baladandayuthapani, The UT MD Anderson Cancer Center 
2:20 PM 

Flexible Modeling of Local Dependence in Variables with a Natural Ordering 
Guo Yu, Department of Statistical Science, Cornell University; Jacob Bien, Cornell University 
2:50 PM 

Enhancing the precision of small-sample sensitivity tests 
David H. Collins, Los Alamos National Laboratory; Michael S. Hamada, Los Alamos National Laboratory; Brian Phillip Weaver, Los Alamos National Laboratory 
3:20 PM 

Thursday, 08/04/2016
Personalized treatment for longitudinal data using unspecified random-effects model 
Hyunkuen Cho, Western Michigan University; Peng Wang, University of Cincinnati; Annie Qu, University of Illinois at Urbana-Champaign 
8:35 AM 

Is Q-learning a valid method of knowing? 
Francisco Diaz, The University of Kansas Medical Center 
8:35 AM 

Use of the VG (Virtual Twins combined with GUIDE) Method in the Development of Precision Medicines 
Jia Jia; Qi Tang, AbbVie; Wangang Xie, AbbVie; Richard A Rode, AbbVie 
8:35 AM 

Comparison of some subgroup identification algorithms for precision medicine in drug development 
Xin Huang; Yan Sun, AbbVie; Saptarshi Chatterjee, AbbVie; Viswanath Devanarayan, AbbVie 
8:55 AM 

Development of predictive signature to identify patient subgroups with differential treatment effect 
Yu-Chuan Chen; James Chen, FDA, National Center for Toxicological Research; Un Jung Lee, FDA/NCTR 
9:35 AM 

Restricted Mean Survival Time-Does Covariate Adjustment Improve Precision in Randomized Clinical Trials? 
Theodore Karrison, University of Chicago; Masha Kocherginsky, University of Chicago 
10:35 AM 

Build Individualized treatment rule on scale using healthcare data with genomic information 
Jin Zhou, University of Arizona; Haoda Fu; Kevin Doubleday, University of Arizona 
10:35 AM 

Individualizing Drug Dosage with Longitudinal Data 
Xiaolu Zhu, University of Illinois, at Urbana-Champaign; Annie Qu, University of Illinois at Urbana-Champaign 
10:50 AM 

Multi-Category Personalized Treatment Rule with Application to Diabetes Data Analysis 
Xuanyao He, Eli Lilly and Company; Haoda Fu 
10:55 AM 

Individualizing Prognosis of Disease Trajectories using Longitudinal Electronic Medical Record data: Application to Scleroderma 
Suchi Saria, Johns Hopkins University; Peter Schulam, Johns Hopkins University 
11:00 AM 

Estimating the optimal treatment regime for time-to-event data 
Min Zhang, University of Michigan; Baqun Zhang, Renmin University 
11:15 AM 

Doubly Robust Estimation of Optimal Treatment Regime in Additive Hazards Regression 
Wenbin Lu, North Carolina State University; Suhyun Kang, North Carolina State University 
11:50 AM 

Sessions or Talks with "Subgroup" in Abstract

Keyword Search Criteria: subgroup returned 38 record(s)
Sunday, 07/31/2016
A subgroup identification method based on quantitative criteria 
Yan Sun, AbbVie; Samad Hedayat, University of Illinois at Chicago 
2:05 PM 

Tests for interaction in clinical studies 
Chul Ahn, FDA-CDRH; Mourad Atlas, FDA-CDRH 
3:20 PM 

Adaptive Sampling for Subgroup Analyses 
Alexander Luedtke, UC Berkeley; Antoine Chambaz, L'Université Paris Ouest Nanterre 
3:20 PM 

Individualized Subgroup Variable Selection 
Xiwei Tang, University of Illinois Urbana-Champaign; Annie Qu, University of Illinois at Urbana-Champaign 
3:35 PM 

Comparing Parametric and Semi-parametric Bayesian Models for Subgroup Analysis in Clinical Trials 
Margaret Gamalo-Siebers, Eli Lilly & Co 
4:20 PM 

Incorporation of individual patient data in network meta-analysis for multiple continuous endpoints, with application to diabetes treatment 
Hwanhee Hong, Johns Hopkins Bloomberg School of Public Health; Haoda Fu; Karen Price, Eli Lilly; Bradley Carlin, University of Minnesota
4:45 PM 

Comparing Novel Approaches to Subgroup Analysis in Early Phase Clinical Trials 
Marius Thomas, Novartis; Björn Bornkamp, Novartis 
5:35 PM 

Monday, 08/01/2016
Subgroup Analysis with semiparametric model in precision medicine 
Xiaofei Chen 


Subgroup Analyses for Count Data using Bayesian Empirical Meta-Analytical Predictive Priors 
Wei-Chen Chen, FDA/CBER; Judy X. Li, FDA; John Scott, FDA 


A STEPP forward in tailoring treatment - new research on the STEPP methodology 
Wai-Ki Yip, Dana Farber Cancer Institute/Harvard TH Chan School of Public Health 
10:15 AM 

A STEPP forward in tailoring treatment - new research on the STEPP methodology 
Wai-Ki Yip, Dana Farber Cancer Institute/Harvard TH Chan School of Public Health 
10:15 AM 

Quantifying treatment benefit in molecular subgroups to assess a predictive biomarker 
Jaya M. Satagopan, Memorial Sloan Kettering Cancer Center; Alexia Iasonos, Memorial Sloan Kettering Cancer Center 
10:35 AM 

Overcoming computational challenges of subgroup identification using SIDES method 
Ilya Lipkovich, Quintiles; Alex Dmitrienko, Quintiles 
2:05 PM 

Randomization does not prevent confounding in assessing interaction or subgroup analyses 
Lei Nie, FDA; Zhiwei Zhang, FDA, Division of Biostatistics of the Center for Devices and Radiological Health; Jialu Zhang, The US FDA 
2:05 PM 

Precision Medicine: How Bayesian Empirical Subgroup Analysis Play a Role 
Judy X. Li, FDA; Wei-Chen Chen, FDA/CBER; John Scott, FDA 
3:05 PM 

Bayesian bounding of the population subgroup which benefits from treatment 
Patrick Schnell, University of Minnesota; Qi Tang, AbbVie; Walt Offen, AbbVie; Bradley Carlin, University of Minnesota 
3:05 PM 

Tuesday, 08/02/2016
Logical Inference of Efficacy in Subgroups and Their Combinations 
Jason C Hsu, Eli Lilly & Company and Ohio State University 
9:05 AM 

Multiple Error Rate Concepts in Assessing Efficacy in Subgroups and Their Mixtures 
Haiyan Xu, Johnson & Johnson; Jason Hsu, The Ohio State University 
10:05 AM 

Selecting optimal subgroups for treatment using many covariates 
Tyler J. VanderWeele, Harvard University 
11:25 AM 

Wednesday, 08/03/2016
Properties Of Adaptive Clinical Trial Signature Design In The Presence Of Gene And Gene -Treatment Interaction 
Alexander Cambon, University of Louisville; Shesh N Rai, University of Louisville; Guy Brock, University of Louisville 


Estimation after Adaptive Population Enrichment Design 
Vlad Dragalin, Janssen Pharmaceutical Companies 
8:35 AM 

Subgroup Analyses in Early Phase Clinical Trials - Challenges and Opportunities 
Björn Bornkamp, Novartis; Marius Thomas, Novartis 
8:35 AM 

Visualizing the Limitations of Subgroup Analyses 
Kevin Andrew Buhr, University of Wisconsin - Madison 
8:55 AM 

Subgroup Analysis in Regulatory Decision Making 
Lilly Yue, Division of Biostatistics, OSB/CDRH/FDA 
9:15 AM 

Subgroups Analyses: Planned versus ad-hoc - How many are too many? 
Vipin Arora, Eli Lilly and Company 
9:35 AM 

Modeling the Effects of Network Attributes on Subgroup Integration 
Qiwen Zheng, University of Maryland at College Park 
11:00 AM 

Case Studies in Academic-Industry-Government Collaborations in Bayesian Adaptive Clinical Trials 
Bradley Carlin, University of Minnesota 
2:05 PM 

Optimizing Dynamic Treatment Regimes via Quality Adjusted Q-learning and Threshold Utility Analysis for Subgroup Analysis in Clinical Trials 
Geoffrey Johnson; Andrew Topp, University of Pittsburgh; Abdus S Wahed, University of Pittsburgh 
2:50 PM 

Change-Plane Analysis for Subgroup Detection and Sample Size Calculation 
Ailin Fan, North Carolina State University; Rui Song, North Carolina State University; Wenbin Lu, North Carolina State University 
3:20 PM 

Cross-Validated STEPP Analysis for Biomarker Subgroup Determination Problems 
Gu Mi, Eli Lilly and Company; Tuan Stevon Nguyen, Eli Lilly and Company; Jonathan Denne, Eli Lilly 
3:35 PM 

Efficient Discovery of Heterogeneous Treatment Effects in Randomized Experiments via Anomalous Pattern Detection 
Edward McFowland, Carlson School of Management, UMNTC; Sriram Somanchi, University of Notre Dame; Daniel B Neill, Carnegie Mellon University 
3:35 PM 

Thursday, 08/04/2016
Use of the VG (Virtual Twins combined with GUIDE) Method in the Development of Precision Medicines 
Jia Jia; Qi Tang, AbbVie; Wangang Xie, AbbVie; Richard A Rode, AbbVie 
8:35 AM 

Comparison of some subgroup identification algorithms for precision medicine in drug development 
Xin Huang; Yan Sun, AbbVie; Saptarshi Chatterjee, AbbVie; Viswanath Devanarayan, AbbVie 
8:55 AM 

Subgroup Identification Based on Multiple Outcomes 
Chensheng Kuang, University of Wisconsin-Madison; Menggang Yu, University of Wisconsin-Madison; Sijian Wang, University of Wisconsin-Madison 
9:15 AM 

Development of predictive signature to identify patient subgroups with differential treatment effect 
Yu-Chuan Chen; James Chen, FDA, National Center for Toxicological Research; Un Jung Lee, FDA/NCTR 
9:35 AM 

Subgroup identification and sample size calculation for the proportional hazard model 
Suhyun Kang, North Carolina State University ; Wenbin Lu, North Carolina State University 
9:35 AM 

Patient Subgroup Identification in Clinical Trials Where Overall Treatment Response is Suboptimal 
Isaac Nuamah, Janssen R & D; Youping Huang, Janssen R&D 
9:50 AM 

Subgroup Identification in a Learn-and-Confirm Setting 
Lei Shen, Eli Lilly and Company 
9:55 AM 

Sessions or Talks with "Genome-Wide" in Abstract

Keyword Search Criteria: genome-wide returned 23 record(s)
Sunday, 07/31/2016
Bayesian large-scale multiple regression with summary statistics from genome-wide association studies 
Xiang Zhu, University of Chicago; Matthew Stephens, University of Chicago 
3:20 PM 

Set-based association analysis of gene-environment interaction using mixed effects models 
Li Hsu, Fred Hutchinson Cancer Research Center 
4:55 PM 

Integrative Genomic Association Testing via Kernel Machine Mediation Analysis 
Angela Hsiaohan Chen, University of Illinois at Urbana-Champaign; Sihai Zhao, University of Illinois at Urbana-Champaign 
5:35 PM 

Monday, 08/01/2016
Beyond Bonferroni: Large-Scale Inference for Complex Disorders 
Wesley Thompson, University of California, San Diego 


A two-stage method for genome-wide gene regulatory network construction 
Chen Chen, Purdue University; Min Zhang, Purdue University; Dabao Zhang, Purdue University 
9:05 AM 

Annotation Regression of Genome-wide Association Studies with Multiple Phenotypes 
Sunyoung Shin, University of Wisconsin Madison; Sunduz Keles, University of Wisconsin-Madison 
9:35 AM 

An efficient genome-wide association test for mixed binary and continuous phenotypes with applications to substance abuse research 
James Yang 
11:55 AM 

Genome-wide Transcription Regulation Discovery for Breast Cancer Cell Lines 
Zangdong He, Department of Biostatistics, Indiana University School of Medicine; Lang Li, Indiana University School of Medicine; Changyu Shen, Department of Biostatistics, Indiana University School of Medicine 
2:50 PM 

Massive significance testing in genetic epidemiology amid replicability crisis 
Dmitri Zaykin, National Institute of Environmental Health Sciences; Olga A Vsevolozhskaya, University of Kentucky 
3:35 PM 

Tuesday, 08/02/2016
Challenges of Predicting Individual Risk in Genome-Wide Association Studies 
Agnes Martine Nielsen, Department of Applied Mathematics and Computer Science, Technical University of Denmark; Helle Krogh Pedersen, Center for Biological Sequence Analysis, Technical University of Denmark; Ramneek Gupta, Center for Biological Sequence Analysis, Technical University of Denmark; Line Harder Clemmensen, Department of Applied Mathematics and Computer Science, Technical University of Denmark 


High-dimensional Cox regression for genome-wide assessment of the prognostic benefit of somatic mutations in ovarian cancer 
Brandon Butcher, University of Iowa; Patrick Breheny, University of Iowa; Donghai Dai, University of Iowa 


Multi-locus Test and Correction for Confounding Effects in Genome-Wide Association Studies 
Donglai Chen, Purdue University; Jun Xie, Purdue University; Chuanhai Liu, Purdue University 
9:45 AM 

Multi-locus Test and Correction for Confounding Effects in Genome-Wide Association Studies 
Donglai Chen, Purdue University; Jun Xie, Purdue University; Chuanhai Liu, Purdue University 
9:45 AM 

Powerful Test Based on Multivariate Joint Effect for Genome-wide Screening 
Yaowu Liu, Purdue University; Jun Xie, Purdue University 
11:35 AM 

Wednesday, 08/03/2016
Applications of HLA allele and amino acid imputation in large-scale genome-wide association studies 
Xiuwen Zheng, University of Washington 
8:45 AM 

Applications of HLA allele and amino acid imputation in large-scale genome-wide association studies 
Xiuwen Zheng, University of Washington 
8:45 AM 

Genome-wide association studies using a penalized moving-window regression 
Minli Bao, University of Iowa; Kai Wang, University of Iowa 
9:50 AM 

Family Bayesian integrative tensor for genetic interaction networks for integrative identification of disease risks in signal pathways 
Xiaojing Wang, University of Connecticut; Chuanhua Julia Xing, XPrecision 
10:35 AM 

1. Robust semiparametric methods for analysis of multivariate secondary phenotypes in case-control genome-wide association studies 
Chuanhua Julia Xing, XPrecision; Elizabeth Schifano, the University of Connecticut; Xihong Lin, Harvard TH Chan School of Public Health 
11:15 AM 

Correction for Confounding Factors in Genome and Epigenome-Wide Association Studies 
Jennifer Listgarten, Microsoft Research 
2:45 PM 

A Novel Bayesian Model for the Local False Discovery Rate 
Wesley Thompson, University of California, San Diego; Rong Zablocki, University of California, San Diego; Richard Levine, San Diego State University 
2:55 PM 

Identify host genetic variants associated with microbiome composition in large scale studies 
Jianxin Shi, National Cancer Institute; Xing Hua, National Cancer Institute 
3:05 PM 

Thursday, 08/04/2016
Testing for genetic associations in arbitrarily structured populations 
Minsun Song, University of Nevada Reno; John D. Storey, Princeton University; Wei Hao, Princeton University 
9:35 AM 

Talks with the word "Targeted" in Abstract

Keyword Search Criteria: targeted returned 12 record(s)
Sunday, 07/31/2016
The Utility of Conditional Autoregressive (CAR) Models for Modeling Efficacy of Molecularly Targeted Agents in Early-Phase Trials
Thomas Braun, University of Michigan 
2:05 PM 

Monday, 08/01/2016
Spatial variability in the persistence of PCV-targeted pneumococcal serotypes among adults 
Joshua Warren, Yale University, Department of Biostatistics; S. Cassandra Pingali, Yale University, Department of Epidemiology of Microbial Disease; Daniel Weinberger, Yale University, Department of Epidemiology of Microbial Disease 
9:20 AM 

Early Phase Designs for Targeted and Immunotherapeutic Agents 
Codruta Chiuzan, Department of Biostatistics, Columbia University 
2:45 PM 

Tuesday, 08/02/2016
Asymptotic analysis of collaborative targeted learning in confounder selection 
Lin Liu, Harvard School of Public Health 
9:35 AM 

Methods for Outlier Detection Using Relative Abundance in Targeted RNASeq Applications 
Bonnie LaFleur; Shripad Sinari, University of Arizona; Dominic LaRoche, HTG Molecular Diagnostics; Kurt Michels, HTG Molecular Diagnostics; Dean Billheimer, University of Arizona 
10:15 AM 

Methods for Outlier Detection Using Relative Abundance in Targeted RNASeq Applications 
Bonnie LaFleur; Shripad Sinari, University of Arizona; Dominic LaRoche, HTG Molecular Diagnostics; Kurt Michels, HTG Molecular Diagnostics; Dean Billheimer, University of Arizona 
10:15 AM 

Detecting Low Allele Fraction Variants Using Targeted DNA Sequencing with Molecular Barcodes 
Chang Xu, Qiagen; Mohammad R Nezami Ranjbar, Qiagen Sciences Inc; John Dicarlo, Qiagen Sciences Inc; Yexun Wang, Qiagen Sciences Inc 
10:50 AM 

Wednesday, 08/03/2016
What works in Boston may not work in Los Angeles: a double robust transportability estimator for understanding site differences in policy interventions 
Kara Rudolph, University of California Berkeley; Mark van der Laan, University of California Berkeley 
8:35 AM 

Variable selection in untargeted metabolomics data analysis 
Alexander Kirpich, University of Florida; Matthew Merritt, University of Florida; George Michailidis, University of Florida; Lauren McIntyre, University of Florida 
8:35 AM 

Variable selection in untargeted metabolomics data analysis 
Alexander Kirpich, University of Florida; Matthew Merritt, University of Florida; George Michailidis, University of Florida; Lauren McIntyre, University of Florida 
8:35 AM 

An Approach to Identifying the Appropriate Source(s) of Consumer Data for a Specific Survey Task 
Frost Hubbard, University of Michigan; Paul Burton, University of Michigan 
11:05 AM 

Collaborative Targeted Learning for Large Scale and High-dimensional Data 
Cheng Ju, University of California, Berkeley; Mark van der Laan, University of California Berkeley; Susan Gruber, Harvard School of Public Health; Jessica Franklin, Brigham and Women's Hospital; Richard Wyss, Brigham and Women's Hospital; Wesley Eddings, Brigham and Women's Hospital; Sebastian Schneeweiss, Brigham and Women's Hospital 
3:20 PM 

Keyword "Sequential Multiple" in Abstract

Keyword Search Criteria: sequential multiple returned 4 record(s)
Monday, 08/01/2016
Cluster-level dynamic treatment regimens and sequential, multiple assignment, randomized trials: Estimation and sample size considerations 
Timothy NeCamp, University of Michigan; Amy Kilbourne, University of Michigan Medical School; Daniel Almirall, University of Michigan, Survey Research Center 


Sequential Multiple Testing for Variable Selection in High Dimensional Linear Model 
Xinping Cui, Univ of California At Riverside; Hailu Chen, Department of Statistics, University of California, Riverside 
8:35 AM 

Wednesday, 08/03/2016
A small n sequential multiple assignment randomized trial for use in rare disease research 
Roy Tamura, University of South Florida 
9:45 AM 

A small n sequential multiple assignment randomized trial for use in rare disease research 
Roy Tamura, University of South Florida 
9:45 AM 

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